| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Bohol Sea | Sea/Bay/Gulf | native | 821 |
| Camotes Sea | Sea/Bay/Gulf | native | 821 |
| Central Indo-Pacific | sea/bay/gulf | native | 821 |
| Eastern Philippines | Sea/Bay/Gulf | native | 821 |
| South China Sea | Sea/Bay/Gulf | native | 81755 |
| Visayan Sea | Sea/Bay/Gulf | native | 821 |
| West Philippine Sea | Sea/Bay/Gulf | native | 81755 |
| Western Coral Triangle | sea/bay/gulf | native | 821 |